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What is Pharmacogenomics in Drug Development?

What is Pharmacogenomics in Drug 

Development?


Table Of Contents
• VIRUS
• DEFINITION
• CLASSIFICATION (BALTIMORE)
GROUP 6 CLASSIFICATION (STRUCTURE, MODE OF REPLICATION)
• RETROVIRUSES 
• HIV
• TREATMENT AND PREVENTIONS 
• CONCLUSION 
• REFERENCES

What is virus?

 A virus is a tiny, non-cellular, infectious agent that replicates only inside the 
living cells of other organisms. It consists of genetic material (DNA or RNA) 
encased in a protein shell (capsid) and can cause diseases in humans, animals, 
and plants.


Baltimore Classification
 This system categorizes viruses into seven groups based on their 
nucleic acid type (DNA or RNA), strandedness (single or double), and 
how they produce mRNA. 
Group I: Double-stranded DNA (dsDNA) 
viruses. 

Group II: Single-stranded DNA (ssDNA) viruses. 

Group III: Double-stranded RNA (dsRNA) viruses. 

Group IV: Positive-sense single￾stranded RNA (ssRNA) viruses.

Group V: Negative-sense single￾stranded RNA (ssRNA) viruses. 

Group VI: ssRNA viruses that use reverse 
transcription to replicate. 

Group VII: dsDNA viruses that use reverse 
transcription to replicate.

Group 6 Classification
i) Retroviruses 
ii) HIV

Introduction to Retroviruses

   A retrovirus is a virus that uses RNA as its genomic material. Upon 
infection with a retrovirus, a cell converts the retroviral RNA into DNA, 
which in turn is inserted into the DNA of the host cell. The cell then 
produces more retroviruses, which infect other cells.

History
 Human Retroviruses:
    The first human retrovirus, HTLV-1, was detected and isolated in 1979 
by Robert C. Gallo.

Structure Of Retroviruses
    Retroviruses are spherical, enveloped particles containing two 
identical single-stranded RNA molecules and a protein core, with the 
outer lipid envelope consisting of glycoproteins.


What is Pharmacogenomics in Drug  Development



Mechanism of Action
 When a retrovirus infects a host cell the viral RNA genome is released into the 
cytoplasm of host cell.
 Then the viral enzyme called reverse transcriptase copies viral RNA to single 
stranded DNA.
 The viral RNA degrades and reverse transcriptase synthesizes the 
complementary second DNA strand.
 Then the double stranded DNA enters the DNA of host cell and integrates into 
the genome of host DNA using viral enzyme integrase. The integrated DNA is 
called provirus.
 Then the viral DNA starts making viral RNA which in turn synthesizes proteins.


Drug development


Diseases caused by retroviruses:(In humans)
 Human immuno efficiency viruses e.g AIDS 
 Human T lymphocyte virus(HTLV-1) associated with adult T-cell leukemia (ATL) and a    
neurodegenerative condition called HTLV-1.

Vaccines against Retroviruses
 Currently there are no licensed vaccines against retroviruses however the 
retroviral vaccines for HIV the research is still ongoing.

Introduction to HIV

HIV, or Human Immunodeficiency Virus, is a virus that attacks the body's immune 
system, specifically targeting white blood cells called CD4 cells, leading to a 
weakened immune system and increased vulnerability to infections and diseases; 
if left untreated, it can progress to AIDS.

History of HIV
 Scientists believe that HIV originally came from a virus particular to 
chimpanzees in West Africa during the 1930s.

Structure of HIV
 HIV-1 virions contain two copies of a single-stranded RNA genome within a 
conical capsid surrounded by a plasma membrane of host-cell origin 
containing viral envelope proteins.
Hiv




Mechanism of Action
The seven stages of the HIV life cycle are:
 Binding
 Fusion
 Reverse transcription 
 integration 
 Replication
 Assembly
 Budding.

Disease caused by HIV
Acquired immunodeficiency syndrome (AIDS), is an ongoing, also called 
chronic, condition. It is caused by the human immunodeficiency virus, 
also called HIV. HIV damages the immune system so that the body is less 
able to fight infection and disease.

Vaccines against HIV
 There are currently no FDA-approved vaccine to prevent or treat HIV 
infection.

Treatment and prevention of retroviruses 
including HIV
 However there are no approved vaccines for retroviruses also including HIV 
but still HIV is being treated with a combination of medicines (pills) taken by 
mouth every day
 Antiretroviral therapy (ART) is also a treatment of people infected with 
human immunodeficiency virus (HIV) using anti-HIV drugs.
 In terms of antiretroviral therapies, drugs like azidothymidine (AZT) and other 
antiviral agents are utilized for both prophylaxis against the progression of 
retroviral infections to disease and for the treatment of established 
infections.

Current Research
 Current retroviral and HIV research focuses on understanding viral 
dynamics, developing new therapies and prevention methods, and 
exploring innovative approaches like gene therapy and therapeutic 
vaccines, with a focus on overcoming challenges like drug resistance 
and persistent viral reservoirs.

Future Directions
 Future research directions in retroviral and HIV studies include 
understanding viral entry and latency, developing novel therapies and 
vaccines, and exploring the role of host factors in viral replication and 
pathogenesis.

Conclusion
 In conclusion, retroviruses, particularly HIV, pose significant 
challenges to human health. Understanding their structure, lifecycle, 
and pathogenesis is crucial for developing effective treatments and 
prevention strategies. While significant progress has been made in 
managing HIV with antiretroviral therapy, ongoing research is essential 
to finding a cure and mitigating the impact of retroviral infections. By 
continuing to advance our knowledge and collaborate globally, we can 
work towards better control and ultimately, the eradication of these 
viruses.

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